Bookmarks for Jarek Meller

Cornell University Library
HotBot
Home page of Jarek Meller
Wirtualna Polska
Numerical Recipes Home Page
New Jersey Online Weather
Welcome to PubMed
RCSB Home Page

Art & Entertaiment

Oil Reproductions of Masterpieces
SILS Art Image Browser: Browse by Artist
Uffizi Firenze - Sala 20 - Di Drer e degli artisti tedeschi
MOVIEWEB: Home Page
PhotoCollect - The Archives - Page#18
WP - /Kultura/Sztuka

Artificial Inteligence

variuos sites related to AI and NN

http://www.ics.uci.edu/AI/ML/MLPapers.html
Rakesh Agrawal's Publications

NN

Discrete Dynamics Lab
Working Papers of Santa Fe Institute
AI/Stats (Vol. 3, No. 4)
Java Applets for Neural Network and Artificial Life
Adams Super Center for Brain Studies

Biosciences

links, books, interesting places

Hypertextbook Chapters
Designer Genes: Genes, Alleles, and Traits
UCL Biochemistry Protein Analysis & Modelling
UCL Biochemistry BSM Group
"Boal's PHYS 4xx: Biophysics: Mechanics of the Cell"
Atlas of the Body
IMB Jena Biocomputing Group: The RNA World at IMB Jena
NDB Biomolecular Resource
Amazon.com: A Glance: Molecular Dynamics : An Overview of Applications in Molecular Biology (From the Series Topics in Molecular and Structural Biology)
Center Of Applied Molecular Engineering
MRC LMB Home Page
British Biophysical Society - What is Biophysics?
Biophysical Chemistry G4170: Primary Sequence Homology Searches
W. M. Keck Center Home Pages
PRACTICAL CONTENTS
PDBs for Biochemistry: Classical Proteins
CGAL: Biology on the Web
Primer on Molecular Genetics (Department of Energy)
Case Studies
Biosciences at Stanford: Welcome!

Chemistry - general

Chemical Physics
useful links for chemistry
Chemistry on the Net
Cambridge Crystallographic Data Centre
The IrYdium Proj. -- Virt Chem Lab
Virtual chemical lab, periodic table aso
periodic.table
Chemistry-related WWW sites in Poland
Periodic Table of Elements

Computational Sciences

CBC: Research and Utility Sites
The CCP1 Newletter
Molecular Modelling: Principles and Applications
Monte Carlo
Chemistry- Software
Computational Physics
Computational Chemistry

CS

computing at Cornell Comp. Sc. Dept.

Computing Facilities Support Staff
CUCS Search Page
CS Info Guide
CUCS Search Page
UNIX
Programming Installers
Computing Facilities Support
Training
CS Web Pages & Servers
EASY-LL/LoadLeveler: Keywords for Batch Command Files
CTC SP Configuration
CTC Software List
Cornell Computer Science - People
Welcome to the Cornell CS Department
Resources

Dictionaries

FOLDOC - Computing Dictionary
WIEM - ATP - POLSKA ENCYKLOPEDIA
Encarta Online Home
Dictionary of computing
WDC keywords list
May sownik Angielsko - Polski (A small English - Polish dictionary)
Hypertext Webster Interface
Jeffrey's Kanji Lookup
Jeffrey's Japanese<->English Dictionary - Gateway
Dictionaries

Education

WorldWide Classroom

Events

Job Resources
Activity: Conferences
Oliver Club

Humanities

FORUM Akademickie
Heraclitus (Internet Encyclopedia of Philosophy)
TLG
Rhetorical Figures
Encyclopaedia Britannica Online Dictionary: Search Results --
Mythology Page

Molecular Dynamics

Cornell et al. 1995 force field
MOIL
Dept of Molecular and Cellular Biology, Harvard University
CHARMm Principles - Performing Molecular Dynamics
Molecular Modeling, Textbooks
Molecular Dynamics on Westech Virtual Job Fair
GROMOS general description
The GROMOS home page
Quantum Chemistry & Molecular Dynamics
Large-Scale Molecular Dynamics Simulations: SPaSM and SPMD
VMD 1.3
Biophysical Chemistry G4170 - Constrained Molecular Dynamics
Molecular Dynamics
http://www.pdb.bnl.gov/Format.doc/Contents_Guide_2.txt
Naukowe bazy danych w ICM
PDB WWW Home Page
The WWW VL Biosciences: Index
Bio Sciences Database

News, journals ..

The New York Times on the Web
The New York Times: Science
The New York Times on the Web
KURIER Plus
Gazeta Bankowa OnLine
The Warsaw Voice
Gazeta Bankowa OnLine
DONOSY najnowszy numer
Rzeczpospolita Online
RFE/RL NewsLine
EUROPA PRESS - Newspapers and Magazines
THE JERUSALEM POST NET EDITION FRONT PAGE
CNN Interactive
KURIER Plus
Readers digest
Central Europe Online Home Page
News from the press

People

Faculty and Graduate School of Engineering
Ron Elber
hiroshi
Nakatsuji group

Physics - general

ROBOT'S HOME PAGE
NIST Atomic Spectra Database
The WWW Unit Converter
Links to on-line unit conversions
Essentials of the SI: Base & derived units
Physics Links

Places

Cornell

important gates to Cornell University

International Students & Scholars Office
Cornell Travel Office
Cornell University Physical Sciences Library Homepage
CUinfo: Cornell University Academic Unit Servers
Cornell University Library
Welcome to Cornell University
CUinfo Maps
CUinfo -Home Page

Virtual tourist

Welcome To MapQuest!
Yahoo! Maps and Driving Directions
TRAVELWEB: HOTEL RESERVATIONS AND FLIGHT RESERVATIONS

Starting points

Israel
Clickable W3 Map of Japan

Japan National Tourist Organization

Israel (tourism, sites ..)

Hebrew: A Living Language
Welcome to Virtual Jerusalem: The Jewish World From the Heart of Israel
New Jersey Online Weather
Ramadan
Virtual Tour of Jerusalem
Israel
The Jerusalem Mosaic

Sites

various sites of interest

Harvard Medical School
http://www.centraleurope.com/frames/frames.php3?url=http://www.cyf-kr.edu.pl/krakow/krakow.html
Science in Poland
The Fritz Haber Center for Molecular Dynamics Research
Movements
Kyoto University Home Page

Hebrew Univ.; Fritz Haber Cent.

Local e-mails and tel.
The Fritz Haber Center for Molecular Dynamics Research

torun

Jaroslaw Meller
Torun home page
Institute of Physics
International Relations Office, N.C. Univ., Torun, POLAND

Ithaca

some local informations

Ithaca Business and Professional Listings
City of Ithaca, New York
University Cooperative Nursery School
Day Care and Child Development Council of Tompkins County, New York
Cayuga Heights Elementary School (CHES) Homepage
Weather Underground: Ithaca, New York Forecast
IthacaNet
Yahoo! Maps and Driving Directions

Programming

Uppsala Software Factory
Uppsala Software Factory
Dictionary of Algorithms, Data Structures, and Problems
Numerical Recipes in C
genetic-programming.com-Home-Page
Programowanie w C++, symulacje i fizyka na serio.
Numerical Recipes in Fortran

LP & DP

linear as well as dynamic programming

ftp://plato.la.asu.edu/pub/mps_format.txt
BPMPD Home Page
Decision Tree for Optimization Software
Welcome to MCS
Steve Wright
Yuying Li

Numerics

Numerical Recipes Books On-Line
Welcome to the Electric Library
Communication Horizons Software
Numerical Methods That Work
Function Categories
netlib/master/index
Numerical Recipes in Fortran
NEOS Guide: Optimization Software
ABB Poland, katalog oprogramowania.

Projects

CRISP - Computer Retrieval of Information on Scientific Projects, Basic Query Form
WebTrends Summary Report
DHHS Public Health Service GRANT APPLICATION (PHS 398)

Chromatography

Թ ۡڡ
Annotated List of Chromatography
Mathematical Modeling and Scale-up of Liquid Chromatography
HPLC (Liquid Chromatography textbook)

Folding

Sali Lab at The Rockefeller University
RECOMB97: References
http://www.mrc-lmb.cam.ac.uk/genomes/jong/bio_people.html
CASP2 poster and software demonstration abstracts
Scientific Report 1996-97 Molecular Biology
PRESAGE : Welcome
3dSearch: Secondary Structure Superposition
SCOP: Structural Classification of Proteins
The PredictProtein server
Dave's Home Page

MD - current projects

Molecular Dynamics: Introduction
Benzene Classical Dynamics
Home page of Jarek Meller
PDB WWW Home Page
Peptide bond geometry
C-PEPTIDE
c24g1 ewald.doc
MELTING PROTEINS: Long-Range forces in Molecular Dynamics Simulations

Myoglobin

Myoglobin
4.12 Myoglobin
Trans Effects in Nitric Oxide Binding to Myoglobin Cavity Mutant H93G
Dynamics of Captured Cavities in Myoglobin
Daniel L. Stein - Ligand Diffusion in Globular Proteins
PDB 1mcy
References
Met-myoglobin
Myoglobin

Porphyrins

QCh, CM

Porphyrin Chemistry Research Directed by K. M. Smith

Proteins

PubMed protein query
AMINO ACIDS CODES AND STRUCTURES
NDB Biomolecular Resource
CIF - Tutorials
PDB-CIF-RASMOL

Proteomics and Genomics

Exploring Distant Protein Sequence Relationships
ExPASy Molecular Biology Server
Fold Recognition Evaluation Details
Uppsala Software Factory - SITE2RT Manual
DDM
The Brutlag Bioinformatics Group - Projects
LOCK: Hierarchical Protein Structure Superposition
A Guide to Structure Prediction
A Threader, LIBRA (Program for Protein Structure Prediction)
ExPASy - ENZYME
PROCAT
THREADER 2 Download Page
Genome Fold Assignments
UCLA-DOE STRUCTURE PREDICTION SERVER
UCLA-DOE STRUCTURE PREDICTION SERVER
SWISS-PROT + TrEMBL Home Page
Protein Search Tools
CAFASP1
CUBIC links Software
PredictProtein: structure prediction and sequence analysis
Computational Services at the EMBL
PSIPRED: a protein structure prediction server
ExPASy - Tools
ExPASy - ScanProsite tool
PSIpred Protein Structure Prediction Server
PREDATOR Documentation
PREDATOR request form
Molecular Biology Research Tools and Databases
EMBL : compose request to the dali server
CASP3 structures and their neighbors
CASP - CASP3 Home page
EMBL : compose request to the dali server
Representative sets of protein structures
All-to-All Protein Structure Alignment by CE
EMBL Dali: email server for 3-D protein structure database searches
SAM: Sequence Alignment and Modeling System
Genomics: A Global Resource
The ProDom protein domain database
http://pbil.ibcp.fr/cgi-bin/npsa_automat.pl?page=npsa_server.html
Gene Control
The ProDom protein domain database
PSI BLAST Search
Sequence Similarity on the World Wide Web - TOC
bio.perl.org - Main page
SCOP: Structural Classification of Proteins
Molecular Biology Programs
Database of Macromolecular Movements
Human Genome Project Information
NIH Software
NIH Software
EBI: FSSP database, fold classification based on structure-structure alignment of proteins
D.T. Jones Home Page - THREADER
threading: 123D
3dSearch: Secondary Structure Superposition
Decoys 'R' Us download and browsing area
BLAST Search
BLAST Search Results
WWW BLAST at NCBI

Quantum Chemistry

all about it, except separated folders

IMS Home Page
General Chemistry
Chemistry on the Internet: The best of the Web 1995
The World-Wide Web Virtual Library: Chemistry
GAMESS Home Page
Water Module

Scientific Journals

physics, chemistry, biology

CRISP - A Database of Biomedical Research Funded By the National Institutes of Health (NIH)
ISI
American Chemical Society Publications: Journal of the American Chemical Society Home Page
Access Excellence - Biosciences
NAR Online
Current Opinion in Structural Biology Vol. 8, No. 3, June 1998
Contents Direct - Add Interests
Current Opinion in Structural Biology Back Issues
Journal Information
ResearchIndex: The NECI Scientific Literature Digital Library [Steve Lawrence, Kurt Bollacker, Lee Giles, NEC Research Institute]
The Proceedings of the National Academy of Sciences Online
Research Journals
Physical Review Letters online
AlphaGalileo Press Centre
EurekAlert! Public Contents
List of elect journ
AR Physical -- Table of Contents (Biophysics and Biomolecular Structure, Vol. 25)
HMS Beagle
Current Biology Vol. 7, No. 9, 1 September 1997
BioMedNet Home
IDEAL homepage
ScienceDirect
AR Physical -- Table of Contents (Physical Chemistry, Vol. 49)
Protein Science
Science Magazine
Electonic Journal Title List
International Journal of Quantum Chemistry
New Journal of Chemistry
Protein Science
Elsevier Science: alerting services
Academic Press - JMB Online
gopher://ccinfo.center.ims.ac.jp/11/.CCIMS
APStracts 3:0410A, 1996.
J. Phys. Chem.
Phys News
J. Phys. Chem.
Journal of Molecular Modeling

Systems

CSC 8550 - Miscellaneous stuff
NEC Z1 - The Evolution of the Computer Ends with Z
WinPlanet - A World of Premium Windows Information and Tutorials - September 15 1999 16:36:19.
Systems
Windows Documentation

SGI, system ...

Editors
SGI, Books List
UNIXhelp for users
Unix and application
Robust Global Fitting

WWW tools

ResumeMaker Software - resume writing, job searching, job interview, resume software, cover letters, career planning, resume posting and other resume services.
The Employment Guide's CareerWeb - Career Advice, jobs, careers, resumes, computers, engineering, resume database, jobs database, books, bookstore, advice, mosaic, monster
New Jersey Online Weather
Polish White and Yellow Pages
World Wide Web and Internet services
NetHelp (KMK)
Yahoo!
WebTools
HotBot
Free Adobe Acrobat Reader Software
WWW Searchers

Personal Toolbar Folder

Members
WebMail
Connections
BizJournal
SmartUpdate
Mktplace

Cornell Theory Center
BioMedNet search
ISI Citation Index Search -- Web of Science version 4.1 (ISI1)
Google